DBMI Publications

Hochheiser, H., Ning, Y., Hernandez, A., Horn, J. R., Jacobson, R., & Boyce, R. D. (2016). Using Nonexperts for Annotating Pharmacokinetic Drug-Drug Interaction Mentions in Product Labeling: A Feasibility Study. JMIR Research Protocols, 5(2), e40. http://doi.org/10.2196/resprot.5028 PMID: 27066806 PMCID: PMC4844909
Stolovitzky, G., Hill, S., Heiser, L, Lu, X, Jiang, X, et al.  (2016) Inferring causal molecular networks: empirical assessment through a community-based effort.  Nature Methods. 13, 310–318 PMID: 26901648 PMCID: PMC4854847  
Shyam Visweswaran, Jessica Tenenbaum,  Ramkiran Gouripeddi at  Informatics Implementation - 2016 Joint Summits, March 2016
Concha-Benavente F, Srivastava RM, Trivedi S, Lei Y, Chandran U, Seethala RR, Freeman GJ, Ferris RL. Identification of the Cell-Intrinsic and -Extrinsic Pathways Downstream of EGFR and IFNy That Induce PD-L1 Expression in Head and Neck Cancer. Cancer Research. 2016 Mar 1;76(5):1031-43. PMID:26676749.
Pineda AL, Ogoe HA, Balasubramanian JB, Rangel Escareño C, Visweswaran S, Herman JG, Gopalakrishnan V. On Predicting lung cancer subtypes using 'omic' data from tumor and tumor-adjacent histologically-normal tissue.  BMC Cancer. 2016 Mar 4;16:184. doi: 10.1186/s12885-016-2223-3. PMID:  26944944  PMCID:  PMC4778315  DOI: 10.1186/s12885-016-2223-3  
N. Batmanghelich, A. Dalca, G. Quon, M. Sabuncu, P. Golland, Probabilistic Modeling of Imaging, Genetics and the Diagnosis. IEEE Transactions on Medical Imaging (TMI), pp 1765-1779, 2016.  PMID: 26886973 DOI: 10.1109/TMI.2016.2527784
Bringing clinical pharmacogenomics information to pharmacists: A qualitative study of information needs and resource requirements. Romagnoli KM, Boyce RD, Empey PE, Adams S, Hochheiser H. International Journal of Medical Informatics , Volume 86 , 54 - 61 PMID: 26725696 PMCID: PMC4720137 [Available on 2017-02-01]
Fisher A, Herbert MI, Douglas GP. Understanding the dispensary workflow at the Birmingham Free Clinic: A proposed framework for an informatics intervention. BMC Health Serv Res. 2016 Feb 19; 16:69. PMCID: PMC4759722. doi: 10.1186/s12913-016-1308-7
Arielle M. Fisher, Mary I. Herbert, Gerald P. Douglas.  Understanding the dispensary workflow at the Birmingham Free Clinic: a proposed framework for an informatics intervention. BMC Health Service Research. 2015 Feb 19;16(1):69. DOI: 10.1186/s12913-016-1308-7  PMID: 26892780 [PubMed-in process]
E.A. Voss, R.D. Boyce, P.B. Ryan, J. van der Lei, P.R. Rijnbeek, M.J.Schuemie, Accuracy of an Automated Knowledge Base for Identifying Drug Adverse Reactions, Journal of Biomedical Informatics, Available online 16 December 2016, ISSN 1532-0464, http://dx.doi.org/10.1016/j.jbi.2016.12.005.

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