DBMI Publications

Pineda, AL, Gopalakrishnan, V. Novel Application of Junction Trees to the Interpretation of Epigenetic Differences among Lung Cancer Subtypes. Proceedings of the AMIA Translational Bioinformatics Summit. March 21-23, 2015. PMID: 26306226   Winner of the Marco Ramoni Distinguished Paper Award.
Pfundner , A., Schönberg, T., Horn., J., Boyce, RD., and Samwald, M. Utilizing the Wikidata system to improve the quality of medical content in Wikipedia in diverse languages: a pilot study. Journal of Medical Internet Research. 2015; 17(5). http://www.jmir.org/2015/5/e110/ .PMCID: PMC4468594
Li Y, Klena NT, Gabriel GC, Liu X, Kim AJ, Lemke K, Chen Y, Chatterjee B, Devine W, Damerla RR, Chang C, Yagi H, San Agustin JT, Thahir M, Anderton S, Lawhead C, Vescovi A, Pratt H, Morgan J, Haynes L, Smith CL, Eppig JT, Reinholdt L, Francis R, Leatherbury L, Ganapathiraju MK, Tobita K, Pazour GJ, Lo CW. Global genetic analysis in mice unveils central role for cilia in congenital heart disease. Nature. 2015 Mar 25. doi: 10.1038/nature14269. [Epub ahead of print] PubMed PMID: 25807483.
Jiang X, Neapolitan RE. LEAP: biomarker inference through learning and evaluating association patterns. Genetic Epidemiology; 2015; 39(3):173–184. PMID: 25677188  PMCID: PMC4366363
Rexit R, Tsui FC, Espino JU, Chrysanthis PK, Wesaratchakit S, Ye Y. An analytics appliance for identifying (near) optimal over-the-counter medicine products as health indicators for influenza surveillance. J Manager Infor Systems. 2015;48:151-63.
Tsui F-C, Adaptive Hospital Readmission Prediction System (AHRPS), Innovation in Healthcare Technology 2014, Pittsburgh, Feb. 14, 2014
Naeini MP, Cooper GF, Hauskrecht M. Obtaining well calibrated probabilities using Bayesian binning. In: Proceedings of the Conference of the Association for the Advancement of Artificial Intelligence (2015) Jan;2015:2901-2907. PMID: 25927013 PMC4410090.
Rafael Ceschin, Ashok Panigrahy, Vanathi Gopalakrishnan. sfDM: Open-Source Software for Temporal Analysis and Visualization of Brain Tumor Diffusion MR Using Serial Functional Diffusion Mapping.  Cancer Informatics 2015:Suppl. 2 1-9
Neapolitan RE, Jiang X. Study of integrated heterogeneous data reveals prognostic power of gene expression for breast cancer survival. PLoS ONE 2015; 10 (2): DOI: 10.1371/journal.pone.0117658.  PMID: 25723490  PMCID: PMC4344205
Cooper, G. F., Villamarin, R., Tsui, F.-C. (Rich), Millett, N., Espino, J. U., & Wagner, M. M. (2015). A Method for Detecting and Characterizing Outbreaks of Infectious Disease from Clinical Reports. Journal of Biomedical Informatics, 53, 15–26. http://doi.org/10.1016/j.jbi.2014.08.011 PMID: 25181466 PMCID: PMC4441330

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